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Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.27
Description : Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0004476 (Archaeplastida) Phylogenetic Tree(s): OG0004476_tree ,
OG_05_0003078 (LandPlants) Phylogenetic Tree(s): OG_05_0003078_tree ,
OG_06_0008243 (SeedPlants) Phylogenetic Tree(s): OG_06_0008243_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00067p00046000 | |
| Cluster | HCCA: Cluster_251 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G06190 | No alias | Rho termination factor | 0.03 | Archaeplastida | |
| Gb_41693 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Solyc09g025260.4.1 | No alias | Rho-N domain-containing protein 1, chloroplastic... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006353 | DNA-templated transcription, termination | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Neighborhood |
| MF | GO:0003747 | translation release factor activity | IEP | Neighborhood |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | Neighborhood |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
| BP | GO:0006415 | translational termination | IEP | Neighborhood |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006788 | heme oxidation | IEP | Neighborhood |
| BP | GO:0006826 | iron ion transport | IEP | Neighborhood |
| MF | GO:0008079 | translation termination factor activity | IEP | Neighborhood |
| MF | GO:0015093 | ferrous iron transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015684 | ferrous iron transport | IEP | Neighborhood |
| BP | GO:0022411 | cellular component disassembly | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| BP | GO:0042168 | heme metabolic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
| BP | GO:0070838 | divalent metal ion transport | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| MF | GO:0072509 | divalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0072511 | divalent inorganic cation transport | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011112 | Rho_N | 306 | 335 |
| No external refs found! |