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  5. AMTR_s00067p00052610

AMTR_s00067p00052610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.31

Description : Protein G1-like2 OS=Oryza sativa subsp. japonica


Gene families : OG0000579 (Archaeplastida) Phylogenetic Tree(s): OG0000579_tree ,
OG_05_0000324 (LandPlants) Phylogenetic Tree(s): OG_05_0000324_tree ,
OG_06_0000239 (SeedPlants) Phylogenetic Tree(s): OG_06_0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00052610
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT1G07090 LSH6 Protein of unknown function (DUF640) 0.03 Archaeplastida
AT1G78815 LSH7 Protein of unknown function (DUF640) 0.03 Archaeplastida
AT2G31160 LSH3 Protein of unknown function (DUF640) 0.05 Archaeplastida
AT3G04510 LSH2 Protein of unknown function (DUF640) 0.03 Archaeplastida
AT4G18610 LSH9 Protein of unknown function (DUF640) 0.07 Archaeplastida
AT5G28490 LSH1 Protein of unknown function (DUF640) 0.02 Archaeplastida
AT5G58500 LSH5 Protein of unknown function (DUF640) 0.03 Archaeplastida
GSVIVT01020708001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.04 Archaeplastida
GSVIVT01021215001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 Archaeplastida
GSVIVT01023521001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... 0.04 Archaeplastida
Gb_36840 No alias Protein G1-like6 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
Gb_39186 No alias Protein G1-like6 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
LOC_Os06g46030.1 No alias Protein G1-like2 OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
MA_12926g0010 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.02 Archaeplastida
Solyc02g076820.4.1 No alias No annotation 0.03 Archaeplastida
Solyc05g055020.4.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1... 0.03 Archaeplastida
Solyc07g062470.4.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 Archaeplastida
Solyc10g007310.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 Archaeplastida
Solyc10g008000.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.08 Archaeplastida
Solyc12g014260.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.04 Archaeplastida
Zm00001e004570_P001 No alias Protein G1-like4 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
Zm00001e012687_P001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 Archaeplastida
Zm00001e019403_P001 No alias Protein G1-like7 OS=Oryza sativa subsp. indica... 0.04 Archaeplastida
Zm00001e027222_P001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.09 Archaeplastida
Zm00001e037775_P001 No alias Protein G1-like2 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005231 excitatory extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
InterPro domains Description Start Stop
IPR006936 ALOG_dom 23 149
No external refs found!