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  5. AMTR_s00067p00076830

AMTR_s00067p00076830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.52

Description : Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0015507 (Archaeplastida) Phylogenetic Tree(s): OG0015507_tree ,
OG_05_0015366 (LandPlants) Phylogenetic Tree(s): OG_05_0015366_tree ,
OG_06_0015067 (SeedPlants) Phylogenetic Tree(s): OG_06_0015067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00076830
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT3G04760 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 Archaeplastida
Solyc04g010060.2.1 No alias Pentatricopeptide repeat-containing protein At3g04760,... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 104 130
IPR002885 Pentatricopeptide_repeat 273 302
IPR002885 Pentatricopeptide_repeat 132 181
IPR002885 Pentatricopeptide_repeat 449 494
IPR002885 Pentatricopeptide_repeat 204 251
IPR002885 Pentatricopeptide_repeat 376 423
IPR002885 Pentatricopeptide_repeat 305 354
No external refs found!