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  5. AMTR_s00067p00081580

AMTR_s00067p00081580 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.58

Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.ERCC6 chromatin remodeling factor


Gene families : OG0005844 (Archaeplastida) Phylogenetic Tree(s): OG0005844_tree ,
OG_05_0006869 (LandPlants) Phylogenetic Tree(s): OG_05_0006869_tree ,
OG_06_0008502 (SeedPlants) Phylogenetic Tree(s): OG_06_0008502_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00081580
Cluster HCCA: Cluster_22


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0032957 inositol trisphosphate metabolic process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0047325 inositol tetrakisphosphate 1-kinase activity IEP Neighborhood
MF GO:0051765 inositol tetrakisphosphate kinase activity IEP Neighborhood
MF GO:0051766 inositol trisphosphate kinase activity IEP Neighborhood
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP Neighborhood
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 785 863
IPR000330 SNF2_N 412 731
No external refs found!