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  5. AMTR_s00067p00095130

AMTR_s00067p00095130 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.73

No description available


Gene families : OG0006266 (Archaeplastida) Phylogenetic Tree(s): OG0006266_tree ,
OG_05_0004900 (LandPlants) Phylogenetic Tree(s): OG_05_0004900_tree ,
OG_06_0014912 (SeedPlants) Phylogenetic Tree(s): OG_06_0014912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00095130
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AT3G62620 No alias sucrose-phosphatase-related 0.03 Archaeplastida
MA_105966g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp3g15270.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c6_16530V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
Solyc09g090290.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016255 attachment of GPI anchor to protein IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!