1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00067p00139470

AMTR_s00067p00139470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.127

Description : F-box protein At2g02240 OS=Arabidopsis thaliana


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000096 (SeedPlants) Phylogenetic Tree(s): OG_06_0000096_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00139470
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G09155 PP2-B15, AtPP2-B15 phloem protein 2-B15 0.02 Archaeplastida
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.03 Archaeplastida
AT3G61060 AtPP2-A13, PP2-A13 phloem protein 2-A13 0.02 Archaeplastida
GSVIVT01019353001 No alias Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01027514001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os02g56820.1 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g02550.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida
Mp1g08180.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g085490.3.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 21 196
No external refs found!