1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00067p00170490

AMTR_s00067p00170490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.174

Description : Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-II-residues E3 ubiquitin ligase (PRT1)


Gene families : OG0003793 (Archaeplastida) Phylogenetic Tree(s): OG0003793_tree ,
OG_05_0005880 (LandPlants) Phylogenetic Tree(s): OG_05_0005880_tree ,
OG_06_0009430 (SeedPlants) Phylogenetic Tree(s): OG_06_0009430_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00170490
Cluster HCCA: Cluster_241


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Neighborhood
CC GO:0005956 protein kinase CK2 complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
CC GO:0030915 Smc5-Smc6 complex IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0106068 SUMO ligase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 210 247
IPR000433 Znf_ZZ 323 361
No external refs found!