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  5. AMTR_s00067p00190600

AMTR_s00067p00190600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.207

Description : Cell wall.cutin and suberin.cuticular lipid formation.alkane-forming pathway.CER1-CER3 alkane-forming complex.CER1 aldehyde decarbonylase component


Gene families : OG0000368 (Archaeplastida) Phylogenetic Tree(s): OG0000368_tree ,
OG_05_0001056 (LandPlants) Phylogenetic Tree(s): OG_05_0001056_tree ,
OG_06_0000996 (SeedPlants) Phylogenetic Tree(s): OG_06_0000996_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00190600
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G02190 No alias Fatty acid hydroxylase superfamily 0.03 Archaeplastida
AT1G02205 CER1 Fatty acid hydroxylase superfamily 0.07 Archaeplastida
AT5G57800 CER3, WAX2, YRE, FLP1 Fatty acid hydroxylase superfamily 0.05 Archaeplastida
GSVIVT01016069001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
GSVIVT01018419001 No alias Protein ECERIFERUM 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01018421001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.04 Archaeplastida
GSVIVT01023740001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
Gb_13363 No alias no description available(sp|q69pa8|glo11_orysj : 168.0) 0.04 Archaeplastida
Gb_13823 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.04 Archaeplastida
Gb_16836 No alias aldehyde-generating component CER3 of CER1-CER3... 0.05 Archaeplastida
Gb_32154 No alias aldehyde-generating component CER3 of CER1-CER3... 0.05 Archaeplastida
LOC_Os02g08230.1 No alias aldehyde-generating component CER3 of CER1-CER3... 0.03 Archaeplastida
LOC_Os02g40784.1 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.04 Archaeplastida
LOC_Os09g25850.1 No alias aldehyde-generating component CER3 of CER1-CER3... 0.07 Archaeplastida
MA_10162310g0010 No alias no description available(sp|b8afi3|glo14_orysi : 241.0)... 0.03 Archaeplastida
MA_10429642g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435047g0010 No alias aldehyde-generating component CER3 of CER1-CER3... 0.02 Archaeplastida
MA_10435069g0020 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.05 Archaeplastida
MA_19405g0010 No alias no description available(sp|q69pa8|glo11_orysj : 169.0) 0.02 Archaeplastida
MA_200120g0020 No alias no description available(sp|a2xay1|glo16_orysi : 122.0) 0.02 Archaeplastida
MA_259293g0010 No alias no description available(sp|b8afi3|glo14_orysi : 180.0) 0.04 Archaeplastida
MA_39280g0020 No alias Protein CER1-like 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_63024g0010 No alias Protein ECERIFERUM 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c18_18020V3.1 No alias Fatty acid hydroxylase superfamily 0.02 Archaeplastida
Smo230422 No alias Cell wall.cutin and suberin.cuticular lipid... 0.02 Archaeplastida
Smo99824 No alias Protein ECERIFERUM 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g088410.3.1 No alias no description available(sp|b8bhf1|glo15_orysi : 263.0) 0.04 Archaeplastida
Solyc01g088430.4.1 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.04 Archaeplastida
Solyc03g065250.4.1 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.03 Archaeplastida
Solyc03g117800.4.1 No alias aldehyde-generating component CER3 of CER1-CER3... 0.05 Archaeplastida
Solyc07g006300.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e012705_P002 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.03 Archaeplastida
Zm00001e015135_P002 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.04 Archaeplastida
Zm00001e023616_P002 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.02 Archaeplastida
Zm00001e034209_P002 No alias aldehyde-generating component CER3 of CER1-CER3... 0.03 Archaeplastida
Zm00001e037664_P003 No alias aldehyde-generating component CER3 of CER1-CER3... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008987 quinolinate synthetase A activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009435 NAD biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019674 NAD metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR021940 Uncharacterised_Wax2_C 398 559
IPR006694 Fatty_acid_hydroxylase 85 200
No external refs found!