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  5. AMTR_s00068p00070880

AMTR_s00068p00070880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.28

No description available


Gene families : OG0000485 (Archaeplastida) Phylogenetic Tree(s): OG0000485_tree ,
OG_05_0000557 (LandPlants) Phylogenetic Tree(s): OG_05_0000557_tree ,
OG_06_0000501 (SeedPlants) Phylogenetic Tree(s): OG_06_0000501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00070880
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G68340 No alias Protein of unknown function (DUF1639) 0.02 Archaeplastida
Pp3c5_17000V3.1 No alias Protein of unknown function (DUF1639) 0.02 Archaeplastida
Solyc04g007340.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011822_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012438 DUF1639 224 273
No external refs found!