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  5. AMTR_s00068p00079880

AMTR_s00068p00079880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.37

Description : Protein biosynthesis.organelle translation machineries.translation elongation.EF-P elongation factor


Gene families : OG0007262 (Archaeplastida) Phylogenetic Tree(s): OG0007262_tree ,
OG_05_0008746 (LandPlants) Phylogenetic Tree(s): OG_05_0008746_tree ,
OG_06_0010560 (SeedPlants) Phylogenetic Tree(s): OG_06_0010560_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00079880
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001130.7 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
BP GO:0043043 peptide biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0017089 glycolipid transporter activity IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0046836 glycolipid transport IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0051861 glycolipid binding IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
InterPro domains Description Start Stop
IPR015365 Elong-fact-P_C 162 215
IPR013185 Transl_elong_KOW-like 38 92
IPR001059 Transl_elong_P/YeiP_cen 101 153
No external refs found!