1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00068p00099460

AMTR_s00068p00099460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.49

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0011497 (SeedPlants) Phylogenetic Tree(s): OG_06_0011497_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00099460
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00139p00079430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
LOC_Os05g38460.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Zm00001e007337_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e010251_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e020963_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028763_P001 No alias transcription factor (MYB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 93 133
IPR001005 SANT/Myb 35 82
No external refs found!