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  5. AMTR_s00068p00158450

AMTR_s00068p00158450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.109

Description : Protodermal factor 1 OS=Arabidopsis thaliana


Gene families : OG0001668 (Archaeplastida) Phylogenetic Tree(s): OG0001668_tree ,
OG_05_0001072 (LandPlants) Phylogenetic Tree(s): OG_05_0001072_tree ,
OG_06_0004253 (SeedPlants) Phylogenetic Tree(s): OG_06_0004253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00158450
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00030870 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00858p00001360 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT2G42840 PDF1 protodermal factor 1 0.1 Archaeplastida
GSVIVT01028336001 No alias No description available 0.03 Archaeplastida
Gb_40194 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g10490.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g13660.1 No alias Protodermal factor 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g43670.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g35970.1 No alias Protodermal factor 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_111671g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp3g10620.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp4g22090.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c7_3869V3.1 No alias No annotation 0.02 Archaeplastida
Smo437656 No alias No description available 0.05 Archaeplastida
Solyc06g083880.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc07g055950.3.1 No alias Protodermal factor 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc12g011010.2.1 No alias Protodermal factor 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e007610_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e014410_P001 No alias Protodermal factor 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e016528_P003 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e019923_P004 No alias Protodermal factor 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e030674_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!