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  5. AMTR_s00068p00162220

AMTR_s00068p00162220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.114

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00162220
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00191700 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.02 Archaeplastida
Cpa|evm.model.tig00020537.52 No alias ABC transporter G family member 17 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01016991001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01016999001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017201001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01028207001 No alias Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum 0.03 Archaeplastida
Gb_34645 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os08g29570.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os09g16449.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os12g13720.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_135152g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_954551g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp1g24380.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp2g21800.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp4g06670.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c14_11830V3.1 No alias pleiotropic drug resistance 7 0.04 Archaeplastida
Pp3c18_21520V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Pp3c19_18700V3.1 No alias pleiotropic drug resistance 7 0.04 Archaeplastida
Solyc02g081870.4.1 No alias abscisic acid transporter (ABCG31). subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e016714_P002 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e040575_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013581 PDR_assoc 384 439
IPR003439 ABC_transporter-like 524 586
IPR013525 ABC_2_trans 724 953
IPR013525 ABC_2_trans 168 379
No external refs found!