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Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.153
Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana
Gene families : OG0006169 (Archaeplastida) Phylogenetic Tree(s): OG0006169_tree ,
OG_05_0007487 (LandPlants) Phylogenetic Tree(s): OG_05_0007487_tree ,
OG_06_0009484 (SeedPlants) Phylogenetic Tree(s): OG_06_0009484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00068p00189110 | |
| Cluster | HCCA: Cluster_234 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0044183 | protein binding involved in protein folding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
| MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Neighborhood |
| MF | GO:0004579 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity | IEP | Neighborhood |
| MF | GO:0005048 | signal sequence binding | IEP | Neighborhood |
| BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Neighborhood |
| BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
| MF | GO:0008378 | galactosyltransferase activity | IEP | Neighborhood |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
| CC | GO:0030904 | retromer complex | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | Neighborhood |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Neighborhood |
| MF | GO:0042277 | peptide binding | IEP | Neighborhood |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| BP | GO:0045185 | maintenance of protein location | IEP | Neighborhood |
| MF | GO:0046923 | ER retention sequence binding | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051235 | maintenance of location | IEP | Neighborhood |
| BP | GO:0051651 | maintenance of location in cell | IEP | Neighborhood |
| BP | GO:0065008 | regulation of biological quality | IEP | Neighborhood |
| BP | GO:0070085 | glycosylation | IEP | Neighborhood |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 492 | 514 |
| IPR002885 | Pentatricopeptide_repeat | 190 | 211 |
| IPR002885 | Pentatricopeptide_repeat | 420 | 449 |
| IPR002885 | Pentatricopeptide_repeat | 88 | 113 |
| IPR002885 | Pentatricopeptide_repeat | 521 | 549 |
| IPR002885 | Pentatricopeptide_repeat | 114 | 161 |
| IPR002885 | Pentatricopeptide_repeat | 216 | 262 |
| IPR002885 | Pentatricopeptide_repeat | 316 | 363 |
| IPR019538 | PSMD5 | 571 | 1075 |
| No external refs found! |