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  5. AMTR_s00069p00082650

AMTR_s00069p00082650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.52

Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000289 (Archaeplastida) Phylogenetic Tree(s): OG0000289_tree ,
OG_05_0003402 (LandPlants) Phylogenetic Tree(s): OG_05_0003402_tree ,
OG_06_0002426 (SeedPlants) Phylogenetic Tree(s): OG_06_0002426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00082650
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 Archaeplastida
GSVIVT01019612001 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
GSVIVT01025521001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.03 Archaeplastida
GSVIVT01028900001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.05 Archaeplastida
GSVIVT01028904001 No alias No description available 0.01 Archaeplastida
LOC_Os06g03830.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
MA_10432182g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 Archaeplastida
MA_137121g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_78644g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 Archaeplastida
Smo228800 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
Smo445059 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
Smo85541 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
Solyc06g071610.3.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
Solyc10g086390.2.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 Archaeplastida
Zm00001e016903_P001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!