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  5. AMTR_s00069p00083920

AMTR_s00069p00083920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.53

No description available


Gene families : OG0006040 (Archaeplastida) Phylogenetic Tree(s): OG0006040_tree ,
OG_05_0007231 (LandPlants) Phylogenetic Tree(s): OG_05_0007231_tree ,
OG_06_0009600 (SeedPlants) Phylogenetic Tree(s): OG_06_0009600_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00083920
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Pp3c9_6890V3.1 No alias methyltransferases;copper ion binding 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006412 translation IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004814 arginine-tRNA ligase activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006420 arginyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008409 5'-3' exonuclease activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0009432 SOS response IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR015324 Ribosomal_Rsm22-like 111 364
No external refs found!