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  5. AT1G54180

AT1G54180 (ATBRXL3, BRX-LIKE3)


Aliases : ATBRXL3, BRX-LIKE3

Description : BREVIS RADIX-like 3


Gene families : OG0001106 (Archaeplastida) Phylogenetic Tree(s): OG0001106_tree ,
OG_05_0000672 (LandPlants) Phylogenetic Tree(s): OG_05_0000672_tree ,
OG_06_0000629 (SeedPlants) Phylogenetic Tree(s): OG_06_0000629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G54180
Cluster HCCA: Cluster_204


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000278 mitotic cell cycle IEP Neighborhood
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
CC GO:0000792 heterochromatin IEP Neighborhood
CC GO:0000932 P-body IEP Neighborhood
MF GO:0004401 histidinol-phosphatase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
CC GO:0005677 chromatin silencing complex IEP Neighborhood
CC GO:0005720 nuclear heterochromatin IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006446 regulation of translational initiation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006547 histidine metabolic process IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0007088 regulation of mitotic nuclear division IEP Neighborhood
BP GO:0007113 endomitotic cell cycle IEP Neighborhood
BP GO:0007276 gamete generation IEP Neighborhood
BP GO:0007346 regulation of mitotic cell cycle IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008252 nucleotidase activity IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008327 methyl-CpG binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity IEP Neighborhood
MF GO:0008934 inositol monophosphate 1-phosphatase activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
MF GO:0010347 L-galactose-1-phosphate phosphatase activity IEP Neighborhood
CC GO:0010369 chromocenter IEP Neighborhood
CC GO:0010370 perinucleolar chromocenter IEP Neighborhood
MF GO:0010385 double-stranded methylated DNA binding IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010564 regulation of cell cycle process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
CC GO:0017053 transcriptional repressor complex IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032451 demethylase activity IEP Neighborhood
BP GO:0032875 regulation of DNA endoreduplication IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
MF GO:0035514 DNA demethylase activity IEP Neighborhood
CC GO:0035770 ribonucleoprotein granule IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Neighborhood
BP GO:0040020 regulation of meiotic nuclear division IEP Neighborhood
BP GO:0040029 regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0042023 DNA endoreduplication IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
MF GO:0043621 protein self-association IEP Neighborhood
BP GO:0043966 histone H3 acetylation IEP Neighborhood
BP GO:0043971 histone H3-K18 acetylation IEP Neighborhood
BP GO:0043972 histone H3-K23 acetylation IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044030 regulation of DNA methylation IEP Neighborhood
BP GO:0044154 histone H3-K14 acetylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
BP GO:0044786 cell cycle DNA replication IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048766 root hair initiation IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051445 regulation of meiotic cell cycle IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0051783 regulation of nuclear division IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
MF GO:0052745 inositol phosphate phosphatase activity IEP Neighborhood
BP GO:0052803 imidazole-containing compound metabolic process IEP Neighborhood
MF GO:0052834 inositol monophosphate phosphatase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0070456 galactose-1-phosphate phosphatase activity IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0071472 cellular response to salt stress IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080188 RNA-directed DNA methylation IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Neighborhood
CC GO:0090568 nuclear transcriptional repressor complex IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR027988 BRX_N 31 62
IPR013591 Brevis_radix_dom 140 174
IPR013591 Brevis_radix_dom 197 220
IPR013591 Brevis_radix_dom 314 369
No external refs found!