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  5. AMTR_s00069p00173700

AMTR_s00069p00173700 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.151

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase


Gene families : OG0000898 (Archaeplastida) Phylogenetic Tree(s): OG0000898_tree ,
OG_05_0005574 (LandPlants) Phylogenetic Tree(s): OG_05_0005574_tree ,
OG_06_0005340 (SeedPlants) Phylogenetic Tree(s): OG_06_0005340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00173700
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Cre09.g387171 No alias Carbohydrate metabolism.nucleotide sugar... 0.05 Archaeplastida
GSVIVT01014091001 No alias Carbohydrate metabolism.nucleotide sugar... 0.03 Archaeplastida
MA_10426762g0010 No alias UDP-L-rhamnose synthase 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008831 dTDP-4-dehydrorhamnose reductase activity IEA Interproscan
BP GO:0045226 extracellular polysaccharide biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005913 dTDP_dehydrorham_reduct 14 231
No external refs found!