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  5. AMTR_s00069p00184200

AMTR_s00069p00184200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.182

Description : BEACH domain-containing protein C2 OS=Arabidopsis thaliana


Gene families : OG0001613 (Archaeplastida) Phylogenetic Tree(s): OG0001613_tree ,
OG_05_0002514 (LandPlants) Phylogenetic Tree(s): OG_05_0002514_tree ,
OG_06_0003025 (SeedPlants) Phylogenetic Tree(s): OG_06_0003025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00184200
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT2G45540 No alias WD-40 repeat family protein / beige-related 0.04 Archaeplastida
Gb_14861 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.02 Archaeplastida
MA_124819g0010 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 Archaeplastida
MA_128035g0020 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.02 Archaeplastida
Mp3g00330.1 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.02 Archaeplastida
Mp6g16270.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c25_6190V3.1 No alias WD-40 repeat family protein / beige-related 0.02 Archaeplastida
Zm00001e007294_P001 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!