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  5. AMTR_s00069p00195790

AMTR_s00069p00195790 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.206

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0000381 (Archaeplastida) Phylogenetic Tree(s): OG0000381_tree ,
OG_05_0000190 (LandPlants) Phylogenetic Tree(s): OG_05_0000190_tree ,
OG_06_0000684 (SeedPlants) Phylogenetic Tree(s): OG_06_0000684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00195790
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00195530 evm_27.TU.AmTr_v1... External stimuli response.salinity.SOS (Salt Overly... 0.03 Archaeplastida
AMTR_s00019p00223190 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AT2G24450 FLA3 FASCICLIN-like arabinogalactan protein 3 precursor 0.04 Archaeplastida
AT2G45470 AGP8, FLA8 FASCICLIN-like arabinogalactan protein 8 0.04 Archaeplastida
AT3G46550 SOS5 Fasciclin-like arabinogalactan family protein 0.04 Archaeplastida
AT3G60900 FLA10 FASCICLIN-like arabinogalactan-protein 10 0.03 Archaeplastida
AT4G12730 FLA2 FASCICLIN-like arabinogalactan 2 0.04 Archaeplastida
AT5G55730 FLA1 FASCICLIN-like arabinogalactan 1 0.06 Archaeplastida
GSVIVT01014684001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 Archaeplastida
GSVIVT01024973001 No alias External stimuli response.salinity.SOS (Salt Overly... 0.04 Archaeplastida
GSVIVT01030085001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Gb_05461 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Gb_12627 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Gb_27317 No alias fasciclin-type arabinogalactan protein. regulatory... 0.04 Archaeplastida
LOC_Os01g62380.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.07 Archaeplastida
LOC_Os02g26320.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os03g03600.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os04g21570.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os04g48490.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os05g38500.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.05 Archaeplastida
LOC_Os08g23180.1 No alias fasciclin-type arabinogalactan protein 0.12 Archaeplastida
LOC_Os08g38270.1 No alias fasciclin-type arabinogalactan protein 0.12 Archaeplastida
LOC_Os09g07350.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os09g30010.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
MA_107g0010 No alias fasciclin-type arabinogalactan protein. regulatory... 0.02 Archaeplastida
Mp4g14280.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Mp5g05390.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Mp5g05430.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Mp5g05440.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Mp5g05460.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Mp5g10880.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Pp3c26_5590V3.1 No alias Fasciclin-like arabinogalactan family protein 0.03 Archaeplastida
Pp3c4_16840V3.1 No alias FASCICLIN-like arabinogalactan protein 8 0.04 Archaeplastida
Smo441324 No alias Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g091530.4.1 No alias classical arabinogalactan protein. fasciclin-type... 0.04 Archaeplastida
Solyc07g045440.1.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc07g065540.1.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Solyc08g006290.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g015690.3.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e007193_P001 No alias classical arabinogalactan protein. fasciclin-type... 0.03 Archaeplastida
Zm00001e014115_P001 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e023434_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e024334_P001 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e028773_P001 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida
Zm00001e031109_P001 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e031831_P001 No alias fasciclin-type arabinogalactan protein. regulatory... 0.04 Archaeplastida
Zm00001e034458_P001 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e037697_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 197 325
No external refs found!