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  5. AMTR_s00071p00011090

AMTR_s00071p00011090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.1

Description : 50S ribosomal protein L2, chloroplastic OS=Amborella trichopoda


Gene families : OG0000693 (Archaeplastida) Phylogenetic Tree(s): OG0000693_tree ,
OG_05_0000458 (LandPlants) Phylogenetic Tree(s): OG_05_0000458_tree ,
OG_06_0000259 (SeedPlants) Phylogenetic Tree(s): OG_06_0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00011090
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
ATCG00830 RPL2.1 ribosomal protein L2 0.03 Archaeplastida
ATCG01310 RPL2.2 ribosomal protein L2 0.03 Archaeplastida
Cre07.g348850 No alias 50S ribosomal protein L2, chloroplastic OS=Chara vulgaris 0.01 Archaeplastida
Mp1g19370.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c2_23491V3.1 No alias Ribosomal protein L2 family 0.03 Archaeplastida
Solyc00g500036.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc00g500080.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc00g500298.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 1 117
No external refs found!