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  5. AMTR_s00071p00074520

AMTR_s00071p00074520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.45

Description : PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0007498 (Archaeplastida) Phylogenetic Tree(s): OG0007498_tree ,
OG_05_0008588 (LandPlants) Phylogenetic Tree(s): OG_05_0008588_tree ,
OG_06_0009635 (SeedPlants) Phylogenetic Tree(s): OG_06_0009635_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00074520
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT1G77090 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.05 Archaeplastida
GSVIVT01010018001 No alias PsbP domain-containing protein 4, chloroplastic... 0.05 Archaeplastida
LOC_Os12g08830.1 No alias PsbP domain-containing protein 4, chloroplastic... 0.03 Archaeplastida
Mp1g26600.1 No alias PsbP domain-containing protein 4, chloroplastic... 0.02 Archaeplastida
Pp3c1_24790V3.1 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.02 Archaeplastida
Zm00001e018395_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004668 protein-arginine deiminase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
BP GO:0009445 putrescine metabolic process IEP Neighborhood
BP GO:0009446 putrescine biosynthetic process IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
MF GO:0009976 tocopherol cyclase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0034311 diol metabolic process IEP Neighborhood
BP GO:0034312 diol biosynthetic process IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
MF GO:0070403 NAD+ binding IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002683 PsbP 122 264
No external refs found!