AMTR_s00071p00136090 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.121

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor

Gene families : OG0003468 (Archaeplastida) Phylogenetic Tree(s): OG0003468_tree ,
OG_05_0003624 (LandPlants) Phylogenetic Tree(s): OG_05_0003624_tree ,
OG_06_0004230 (SeedPlants) Phylogenetic Tree(s): OG_06_0004230_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00071p00136090
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zm00001e027490_P002	No alias	transcription factor (TFIIIa). C2H2 zinc finger...	0.03	Archaeplastida
Zm00001e029529_P002	No alias	transcription factor (TFIIIa). C2H2 zinc finger...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0008026	ATP-dependent helicase activity	IEP	Neighborhood
MF	GO:0070035	purine NTP-dependent helicase activity	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!