0.46 0.38 0.5 0.4 0.44 0.84 1.1 0.88 1.22 1.15 1.18 0.93 -1.9 -1.53 -1.57 -0.27 -0.86 -0.42 0.13 0.89 0.81 1.43 1.76 1.71 1.58 -0.26 0.42 -0.37 0.77 0.66 0.39 0.75 1.17 1.07 -0.2 -0.09 0.01 -0.32 0.44 0.97 1.18 2.26 1.42 -1.51 -0.93 -2.64 -1.7 -1.96 -2.07 -2.04 -1.86 -2.05 -1.9 -0.85 -0.86 -0.94 -1.19 -2.5 -3.18 -2.4 -2.75 -3.19 -2.97 -2.68 -2.9 -1.42 -3.28 -3.14 -3.37 -1.89 -2.42 -2.86 -1.06 -1.99 -1.42 -3.28 -1.74 -1.59 -3.14 -3.37 -1.89 -2.42 -3.09 -1.73 -1.41 -1.78 -1.31
Cre07.g325727
-0.86 -0.81 -0.73 -0.14 -0.37 0.4 0.52 0.5 -0.03 0.26 0.49 -0.3 -0.02 -0.18 0.0 -0.19 -0.15 -0.27 -0.07 -0.31 0.18 1.08 1.13 1.21 1.61 1.47 1.89 1.45 -1.32 -1.39 - -0.71 0.3 -1.96 -2.73 0.38 0.38 1.43 1.47 1.64 1.31 -0.16 -0.74 -3.04 0.17 0.45 0.79 1.54 1.15 1.17 0.14 -0.05 -1.77 -0.01 0.23 0.93 1.29 1.23 1.08 0.11 0.35 -2.77 -2.02 -1.7 -1.72 -1.64 -1.59 -1.77 -1.13 0.19 0.23 0.38 -0.53 -3.21 -3.38 -2.01 -2.34 -2.8 -3.07 -2.3 -2.76 -0.62 -2.2 -1.63 -2.19 -2.23 -2.48 0.23 -0.38 -0.09 -0.62 -2.2 -1.97 -1.51 -1.63 -2.19 -2.23 -2.48 -0.8 -0.62 -0.65 -0.56 -0.86
Cre07.g332084
-3.89 - -1.94 -1.62 -1.57 -1.35 -0.7 -2.47 -1.57 -1.84 -0.92 0.48 0.2 -0.53 0.52 0.59 0.48 0.29 0.79 0.91 0.8 1.42 1.33 1.24 1.2 2.02 1.93 1.59 -2.55 - -2.51 -1.22 - -0.28 -1.9 -0.2 0.56 0.78 1.44 1.88 1.48 0.25 -1.35 -1.99 -1.05 0.23 1.23 1.54 1.89 1.8 -0.47 -0.14 -0.6 -0.68 -0.0 -0.8 -0.66 -0.77 1.03 0.34 -0.05 -1.58 - -3.5 -1.67 -1.22 -2.43 -0.82 -0.45 0.66 0.11 -0.03 -0.54 -1.98 -0.83 -1.7 -2.62 -4.12 -3.38 -1.0 -1.41 -0.37 -0.82 0.29 -0.34 -1.53 -0.7 -0.92 -2.26 -0.4 -0.37 -0.82 -1.58 -0.5 0.29 -0.34 -1.53 -0.7 0.29 -0.6 -0.93 -1.0 -1.21
Cre07.g332100
-2.15 -1.71 -1.7 -0.71 -1.67 -1.57 -1.18 -1.05 -1.15 -0.71 -0.41 -0.75 -0.53 0.86 0.74 0.82 0.57 0.57 0.64 0.61 0.51 1.12 1.2 1.13 1.61 1.77 1.68 1.79 -0.7 -2.58 -2.09 -3.55 -2.01 -1.31 -1.29 -0.81 0.39 0.79 1.1 1.6 1.56 0.21 -1.2 -0.9 -1.39 -0.35 1.2 1.02 1.8 2.14 0.06 -0.71 -0.57 -0.63 -0.86 -1.03 -1.01 -1.6 0.63 0.44 0.03 -1.52 -2.4 -1.96 -0.83 -1.0 -1.07 -1.18 0.11 0.97 0.05 0.35 0.13 -2.3 -1.64 -0.86 -1.19 -1.65 -2.01 -1.16 -1.31 -0.63 -1.13 0.21 -0.21 -2.13 -0.81 -0.3 -0.43 -0.74 -0.63 -1.13 -1.49 -0.98 0.21 -0.21 -2.13 -0.81 0.2 -0.65 -1.37 -0.77 -1.34
Cre07.g334575
-1.01 -0.77 -0.57 -0.3 -0.63 -0.31 0.06 0.15 -0.16 0.37 0.61 0.84 0.77 1.05 0.91 0.78 0.81 0.38 0.29 0.77 0.14 0.61 0.63 0.39 0.9 AT1G54590 details

AT1G54590


Description : INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; CONTAINS InterPro DOMAIN/s: Prp18 (InterPro:IPR004098); BEST Arabidopsis thaliana protein match is: splicing factor Prp18 family protein (TAIR:AT1G03140.1); Has 388 Blast hits to 388 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 132; Plants - 48; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink).


Gene families : OG0003021 (Archaeplastida) Phylogenetic Tree(s): OG0003021_tree ,
OG_05_0002749 (LandPlants) Phylogenetic Tree(s): OG_05_0002749_tree ,
OG_06_0003135 (SeedPlants) Phylogenetic Tree(s): OG_06_0003135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G54590


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005681 spliceosomal complex ISS Interproscan
BP GO:0008380 RNA splicing ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0006817 phosphate ion transport IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016036 cellular response to phosphate starvation IEP Neighborhood
InterPro domains Description Start Stop
IPR004098 Prp18 171 312
No external refs found!