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  5. AMTR_s00071p00162860

AMTR_s00071p00162860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.156

Description : 4,5-DOPA dioxygenase extradiol OS=Beta vulgaris


Gene families : OG0003484 (Archaeplastida) Phylogenetic Tree(s): OG0003484_tree ,
OG_05_0005055 (LandPlants) Phylogenetic Tree(s): OG_05_0005055_tree ,
OG_06_0004902 (SeedPlants) Phylogenetic Tree(s): OG_06_0004902_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00162860
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT4G15093 No alias catalytic LigB subunit of aromatic ring-opening... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006725 cellular aromatic compound metabolic process IEA Interproscan
MF GO:0008198 ferrous iron binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR004183 Xdiol_dOase_suB 3 258
No external refs found!