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  5. AMTR_s00073p00163500

AMTR_s00073p00163500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00073.47

No description available


Gene families : OG0004063 (Archaeplastida) Phylogenetic Tree(s): OG0004063_tree ,
OG_05_0002821 (LandPlants) Phylogenetic Tree(s): OG_05_0002821_tree ,
OG_06_0003077 (SeedPlants) Phylogenetic Tree(s): OG_06_0003077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00073p00163500
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013160001 No alias Protein HAIKU1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Mp8g09220.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008889 VQ 11 37
No external refs found!