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  5. AMTR_s00074p00034110

AMTR_s00074p00034110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00074.5

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-C2-type E3 ligase


Gene families : OG0002851 (Archaeplastida) Phylogenetic Tree(s): OG0002851_tree ,
OG_05_0002459 (LandPlants) Phylogenetic Tree(s): OG_05_0002459_tree ,
OG_06_0003578 (SeedPlants) Phylogenetic Tree(s): OG_06_0003578_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00074p00034110
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT3G48070 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Gb_06236 No alias RING-C2-class E3 ligase 0.03 Archaeplastida
Gb_13480 No alias RING-C2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!