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  5. AT1G55030

AT1G55030


Description : RNI-like superfamily protein


Gene families : OG0001094 (Archaeplastida) Phylogenetic Tree(s): OG0001094_tree ,
OG_05_0000663 (LandPlants) Phylogenetic Tree(s): OG_05_0000663_tree ,
OG_06_0000324 (SeedPlants) Phylogenetic Tree(s): OG_06_0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55030
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G05080 No alias F-box/RNI-like/FBD-like domains-containing protein 0.1 Archaeplastida
AT1G32375 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 Archaeplastida
AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.07 Archaeplastida
AT3G26930 No alias Protein with RNI-like/FBD-like domains 0.07 Archaeplastida
AT3G49030 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.11 Archaeplastida
AT3G49040 No alias F-box/RNI-like superfamily protein 0.08 Archaeplastida
AT3G49045 No alias No description available 0.07 Archaeplastida
AT4G00160 No alias F-box/RNI-like/FBD-like domains-containing protein 0.11 Archaeplastida
AT4G00315 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida
AT4G10410 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G10420 No alias FBD / Leucine Rich Repeat domains containing protein 0.03 Archaeplastida
AT4G13965 No alias Protein with RNI-like/FBD-like domains 0.06 Archaeplastida
AT4G15060 No alias CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),... 0.02 Archaeplastida
AT4G26340 No alias F-box/RNI-like/FBD-like domains-containing protein 0.11 Archaeplastida
AT5G38565 No alias F-box/FBD-like domains containing protein 0.05 Archaeplastida
AT5G38570 No alias F-box/RNI-like superfamily protein 0.08 Archaeplastida
AT5G38590 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 Archaeplastida
AT5G40750 No alias FBD / Leucine Rich Repeat domains containing protein 0.04 Archaeplastida
AT5G44850 No alias Protein with RNI-like/FBD-like domains 0.05 Archaeplastida
AT5G52460 EDA41 FBD, F-box and Leucine Rich Repeat domains containing protein 0.03 Archaeplastida
AT5G56370 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT5G56410 No alias Protein with RNI-like/FBD-like domains 0.05 Archaeplastida
AT5G56440 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G56570 No alias Leucine-rich repeat (LRR) family protein 0.09 Archaeplastida
AT5G56700 No alias FBD / Leucine Rich Repeat domains containing protein 0.03 Archaeplastida
AT5G56810 No alias F-box/RNI-like/FBD-like domains-containing protein 0.07 Archaeplastida
AT5G56820 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 Archaeplastida
AT5G60610 No alias F-box/RNI-like superfamily protein 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006360 transcription by RNA polymerase I IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR006566 FBD 345 389
IPR013101 Leu-rich_rpt_2 154 179
No external refs found!