AMTR_s00074p00190580 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00074.113

Description : Protein modification.protein folding and quality control.protein folding catalyst activities.TF nascent polypeptide chaperone

Gene families : OG0006990 (Archaeplastida) Phylogenetic Tree(s): OG0006990_tree ,
OG_05_0008337 (LandPlants) Phylogenetic Tree(s): OG_05_0008337_tree ,
OG_06_0010046 (SeedPlants) Phylogenetic Tree(s): OG_06_0010046_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AMTR_s00074p00190580
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT5G55220 No alias trigger factor type chaperone family protein 0.05 Archaeplastida
GSVIVT01037722001 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
LOC_Os06g20320.1 No alias nascent polypeptide chaperone (TF) 0.03 Archaeplastida
MA_10429151g0010 No alias nascent polypeptide chaperone (TF) 0.04 Archaeplastida
Solyc07g064950.3.1 No alias nascent polypeptide chaperone (TF) 0.03 Archaeplastida
Zm00001e039244_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
BP GO:0015031 protein transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR008881 Trigger_fac_ribosome-bd_bac 46 183
IPR008880 Trigger_fac_C 319 477
No external refs found!