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  5. AMTR_s00076p00089510

AMTR_s00076p00089510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00076.23

No description available


Gene families : OG0000329 (Archaeplastida) Phylogenetic Tree(s): OG0000329_tree ,
OG_05_0000149 (LandPlants) Phylogenetic Tree(s): OG_05_0000149_tree ,
OG_06_0000063 (SeedPlants) Phylogenetic Tree(s): OG_06_0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00076p00089510
Cluster HCCA: Cluster_95
  • Co-expression Networks

    • Target Alias Description ECC score Gene Family Method Actions
    LOC_Os04g56570.1 No alias no hits & (original description: none) 0.04 Archaeplastida
    MA_553359g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
    Zm00001e006611_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
    Zm00001e020167_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

    Type GO Term Name Evidence Source
    BP GO:0030001 metal ion transport IEA Interproscan
    MF GO:0046872 metal ion binding IEA Interproscan
    Toggle parental
    Type GO Term Name Evidence Source
    BP GO:0006397 mRNA processing IEP Neighborhood
    BP GO:0006605 protein targeting IEP Neighborhood
    BP GO:0008104 protein localization IEP Neighborhood
    CC GO:0009521 photosystem IEP Neighborhood
    CC GO:0009523 photosystem II IEP Neighborhood
    CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
    BP GO:0015031 protein transport IEP Neighborhood
    BP GO:0015833 peptide transport IEP Neighborhood
    BP GO:0015979 photosynthesis IEP Neighborhood
    BP GO:0016070 RNA metabolic process IEP Neighborhood
    BP GO:0016071 mRNA metabolic process IEP Neighborhood
    CC GO:0019898 extrinsic component of membrane IEP Neighborhood
    BP GO:0033036 macromolecule localization IEP Neighborhood
    BP GO:0042886 amide transport IEP Neighborhood
    BP GO:0044237 cellular metabolic process IEP Neighborhood
    CC GO:0044436 thylakoid part IEP Neighborhood
    BP GO:0045184 establishment of protein localization IEP Neighborhood
    MF GO:0048037 cofactor binding IEP Neighborhood
    MF GO:0050662 coenzyme binding IEP Neighborhood
    BP GO:0071702 organic substance transport IEP Neighborhood
    BP GO:0071705 nitrogen compound transport IEP Neighborhood
    CC GO:1990204 oxidoreductase complex IEP Neighborhood
    InterPro domains Description Start Stop
    IPR006121 HMA_dom 1 51
    No external refs found!