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  5. AMTR_s00077p00026550

AMTR_s00077p00026550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.12

Description : BTB/POZ domain-containing protein At3g56230 OS=Arabidopsis thaliana


Gene families : OG0000829 (Archaeplastida) Phylogenetic Tree(s): OG0000829_tree ,
OG_05_0003207 (LandPlants) Phylogenetic Tree(s): OG_05_0003207_tree ,
OG_06_0003799 (SeedPlants) Phylogenetic Tree(s): OG_06_0003799_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00026550
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT3G56230 No alias BTB/POZ domain-containing protein 0.04 Archaeplastida
GSVIVT01032719001 No alias BTB/POZ domain-containing protein At3g56230... 0.03 Archaeplastida
Mp1g13890.1 No alias BTB/POZ domain-containing protein At3g56230... 0.02 Archaeplastida
Mp8g13450.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007090 obsolete regulation of S phase of mitotic cell cycle IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!