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  5. AMTR_s00077p00043830

AMTR_s00077p00043830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.26

Description : Redox homeostasis.enzymatic reactive oxygen species scavengers.superoxide dismutase activities.manganese superoxide dismutase


Gene families : OG0003026 (Archaeplastida) Phylogenetic Tree(s): OG0003026_tree ,
OG_05_0005815 (LandPlants) Phylogenetic Tree(s): OG_05_0005815_tree ,
OG_06_0006556 (SeedPlants) Phylogenetic Tree(s): OG_06_0006556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00043830
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AT3G10920 MEE33, MSD1, ATMSD1 manganese superoxide dismutase 1 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity IEP Neighborhood
MF GO:0004807 triose-phosphate isomerase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019832 Mn/Fe_SOD_C 120 201
IPR019831 Mn/Fe_SOD_N 29 110
No external refs found!