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  5. AMTR_s00077p00055780

AMTR_s00077p00055780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.33

Description : MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana


Gene families : OG0000683 (Archaeplastida) Phylogenetic Tree(s): OG0000683_tree ,
OG_05_0004120 (LandPlants) Phylogenetic Tree(s): OG_05_0004120_tree ,
OG_06_0004772 (SeedPlants) Phylogenetic Tree(s): OG_06_0004772_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00055780
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Smo234182 No alias MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!