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  5. AT1G55240

AT1G55240


Description : Family of unknown function (DUF716)


Gene families : OG0000612 (Archaeplastida) Phylogenetic Tree(s): OG0000612_tree ,
OG_05_0001252 (LandPlants) Phylogenetic Tree(s): OG_05_0001252_tree ,
OG_06_0000759 (SeedPlants) Phylogenetic Tree(s): OG_06_0000759_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55240
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT1G55230 No alias Family of unknown function (DUF716) 0.05 Archaeplastida
Gb_07534 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g40570.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_73440g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g006050.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g050430.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000314 organellar small ribosomal subunit IEP Neighborhood
MF GO:0004311 farnesyltranstransferase activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
CC GO:0005763 mitochondrial small ribosomal subunit IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
BP GO:0006120 mitochondrial electron transport, NADH to ubiquinone IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006743 ubiquinone metabolic process IEP Neighborhood
BP GO:0006744 ubiquinone biosynthetic process IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
BP GO:0009812 flavonoid metabolic process IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
BP GO:0010683 tricyclic triterpenoid metabolic process IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
BP GO:0016093 polyprenol metabolic process IEP Neighborhood
BP GO:0016094 polyprenol biosynthetic process IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0019137 thioglucosidase activity IEP Neighborhood
BP GO:0019348 dolichol metabolic process IEP Neighborhood
BP GO:0019408 dolichol biosynthetic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0051552 flavone metabolic process IEP Neighborhood
BP GO:0051554 flavonol metabolic process IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0071695 anatomical structure maturation IEP Neighborhood
BP GO:0080003 thalianol metabolic process IEP Neighborhood
MF GO:0080004 thalian-diol desaturase activity IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
MF GO:1990135 flavonoid sulfotransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006904 DUF716_TMEM45 122 258
No external refs found!