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Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.83
Description : Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana
Gene families : OG0044602 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0044209 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0038755 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00077p00100730 | |
| Cluster | HCCA: Cluster_89 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000156 | phosphorelay response regulator activity | IEP | Neighborhood |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
| MF | GO:0004221 | obsolete ubiquitin thiolesterase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| CC | GO:0016272 | prefoldin complex | IEP | Neighborhood |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| MF | GO:0060089 | molecular transducer activity | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 122 | 151 |
| IPR002885 | Pentatricopeptide_repeat | 224 | 252 |
| IPR002885 | Pentatricopeptide_repeat | 397 | 420 |
| IPR002885 | Pentatricopeptide_repeat | 94 | 121 |
| IPR002885 | Pentatricopeptide_repeat | 296 | 321 |
| IPR002885 | Pentatricopeptide_repeat | 423 | 469 |
| IPR002885 | Pentatricopeptide_repeat | 322 | 369 |
| IPR002885 | Pentatricopeptide_repeat | 3 | 46 |
| No external refs found! |