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  5. AMTR_s00077p00118320

AMTR_s00077p00118320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.106

Description : Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana


Gene families : OG0010517 (Archaeplastida) Phylogenetic Tree(s): OG0010517_tree ,
OG_05_0015257 (LandPlants) Phylogenetic Tree(s): OG_05_0015257_tree ,
OG_06_0015074 (SeedPlants) Phylogenetic Tree(s): OG_06_0015074_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00118320
Cluster HCCA: Cluster_140


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 403 434
IPR002885 Pentatricopeptide_repeat 145 176
IPR002885 Pentatricopeptide_repeat 183 233
IPR002885 Pentatricopeptide_repeat 43 90
IPR002885 Pentatricopeptide_repeat 318 365
IPR002885 Pentatricopeptide_repeat 254 303
IPR002885 Pentatricopeptide_repeat 116 143
IPR002885 Pentatricopeptide_repeat 446 471
IPR002885 Pentatricopeptide_repeat 12 41
No external refs found!