1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00077p00120590

AMTR_s00077p00120590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.113

No description available


Gene families : OG0006462 (Archaeplastida) Phylogenetic Tree(s): OG0006462_tree ,
OG_05_0004446 (LandPlants) Phylogenetic Tree(s): OG_05_0004446_tree ,
OG_06_0003080 (SeedPlants) Phylogenetic Tree(s): OG_06_0003080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00120590

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00195080 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00049p00178220 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00049p00183070 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 58 95
No external refs found!