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  5. AMTR_s00077p00161250

AMTR_s00077p00161250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.167

Description : Root phototropism protein 2 OS=Arabidopsis thaliana


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0000480 (LandPlants) Phylogenetic Tree(s): OG_05_0000480_tree ,
OG_06_0000628 (SeedPlants) Phylogenetic Tree(s): OG_06_0000628_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00161250
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00262560 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g48800... 0.03 Archaeplastida
AMTR_s00029p00109650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00049p00216130 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g67900... 0.04 Archaeplastida
AMTR_s00061p00175030 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g47800... 0.04 Archaeplastida
AT1G67900 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT2G14820 NPY2 Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
AT2G30520 RPT2 Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT3G22104 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT5G47800 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.05 Archaeplastida
AT5G66560 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
GSVIVT01000400001 No alias BTB/POZ domain-containing protein At3g22104... 0.04 Archaeplastida
GSVIVT01003773001 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.03 Archaeplastida
GSVIVT01012508001 No alias Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01025693001 No alias BTB/POZ domain-containing protein At5g03250... 0.03 Archaeplastida
Gb_32071 No alias BTB/POZ domain-containing protein At5g48130... 0.04 Archaeplastida
Gb_32606 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
Gb_34273 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
LOC_Os02g35970.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
LOC_Os03g41350.2 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os04g57800.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os05g12030.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g39530.1 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
LOC_Os09g09370.2 No alias BTB/POZ domain-containing protein At5g47800... 0.04 Archaeplastida
LOC_Os11g02610.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g02530.2 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g39380.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 Archaeplastida
MA_135496g0010 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_178653g0010 No alias BTB/POZ domain-containing protein At3g22104... 0.03 Archaeplastida
MA_479907g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
MA_52004g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.05 Archaeplastida
MA_89781g0010 No alias BTB/POZ domain-containing protein At5g48130... 0.04 Archaeplastida
Mp5g03480.1 No alias BTB/POZ domain-containing protein At1g67900... 0.03 Archaeplastida
Pp3c12_21560V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c2_22420V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c3_37660V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Smo231529 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Archaeplastida
Solyc01g107180.3.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g013570.3.1 No alias BTB/POZ domain-containing protein At1g67900... 0.04 Archaeplastida
Solyc07g043130.3.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g066730.2.1 No alias BTB/POZ domain-containing protein At3g44820... 0.02 Archaeplastida
Zm00001e000726_P002 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e005126_P001 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e006815_P001 No alias BTB/POZ domain-containing protein At5g03250... 0.02 Archaeplastida
Zm00001e009259_P001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e014883_P001 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
Zm00001e016726_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e029295_P001 No alias BTB/POZ domain-containing protein At1g30440... 0.04 Archaeplastida
Zm00001e036310_P001 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e039271_P001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004594 pantothenate kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005788 endoplasmic reticulum lumen IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 182 434
No external refs found!