AMTR_s00077p00173880 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.193

Description : Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana

Gene families : OG0000285 (Archaeplastida) Phylogenetic Tree(s): OG0000285_tree ,
OG_05_0003001 (LandPlants) Phylogenetic Tree(s): OG_05_0003001_tree ,
OG_06_0002543 (SeedPlants) Phylogenetic Tree(s): OG_06_0002543_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00077p00173880
Cluster	HCCA: Cluster_216

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01028790001	No alias	Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01028792001	No alias	ATPase family AAA domain-containing protein FIGL1...	0.04	Archaeplastida
Gb_28174	No alias	Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis...	0.04	Archaeplastida
Mp5g19850.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc03g007760.3.1	No alias	ATPase family AAA domain-containing protein FIGL1...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0009244	lipopolysaccharide core region biosynthetic process	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016668	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	IEP	Neighborhood
BP	GO:0046401	lipopolysaccharide core region metabolic process	IEP	Neighborhood
MF	GO:0047134	protein-disulfide reductase activity	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	535	665

External Links

No external refs found!