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Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.196
Description : Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0008311 (Archaeplastida) Phylogenetic Tree(s): OG0008311_tree ,
OG_05_0007188 (LandPlants) Phylogenetic Tree(s): OG_05_0007188_tree ,
OG_06_0007441 (SeedPlants) Phylogenetic Tree(s): OG_06_0007441_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00077p00176610 | |
| Cluster | HCCA: Cluster_22 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Neighborhood |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Neighborhood |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0008289 | lipid binding | IEP | Neighborhood |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Neighborhood |
| MF | GO:0008685 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity | IEP | Neighborhood |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Neighborhood |
| MF | GO:0016407 | acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Neighborhood |
| MF | GO:0016849 | phosphorus-oxygen lyase activity | IEP | Neighborhood |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 535 | 563 |
| IPR002885 | Pentatricopeptide_repeat | 603 | 631 |
| IPR002885 | Pentatricopeptide_repeat | 395 | 419 |
| IPR002885 | Pentatricopeptide_repeat | 430 | 460 |
| IPR002885 | Pentatricopeptide_repeat | 641 | 667 |
| IPR002885 | Pentatricopeptide_repeat | 316 | 364 |
| IPR002885 | Pentatricopeptide_repeat | 211 | 259 |
| IPR002885 | Pentatricopeptide_repeat | 463 | 507 |
| No external refs found! |