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  5. AMTR_s00078p00022690

AMTR_s00078p00022690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.5

Description : Cucumber peeling cupredoxin OS=Cucumis sativus


Gene families : OG0000039 (Archaeplastida) Phylogenetic Tree(s): OG0000039_tree ,
OG_05_0000026 (LandPlants) Phylogenetic Tree(s): OG_05_0000026_tree ,
OG_06_0003079 (SeedPlants) Phylogenetic Tree(s): OG_06_0003079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00022690
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00125240 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
Gb_29238 No alias Lamin-like protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g15710.1 No alias Chemocyanin OS=Lilium longiflorum (sp|p60496|babl_lillo : 95.9) 0.02 Archaeplastida
LOC_Os06g50650.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_49347g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g150104.1.1 No alias Stellacyanin OS=Toxicodendron vernicifluum... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0009055 electron transfer activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 41 127
No external refs found!