1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00078p00062760

AMTR_s00078p00062760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.33

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.heme synthesis and modification.heme oxygenase


Gene families : OG0002579 (Archaeplastida) Phylogenetic Tree(s): OG0002579_tree ,
OG_05_0003211 (LandPlants) Phylogenetic Tree(s): OG_05_0003211_tree ,
OG_06_0002345 (SeedPlants) Phylogenetic Tree(s): OG_06_0002345_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00062760
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009554001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.heme... 0.03 Archaeplastida
Gb_02806 No alias heme oxygenase 0.03 Archaeplastida
LOC_Os03g27770.1 No alias heme oxygenase 0.04 Archaeplastida
Mp6g10740.1 No alias heme oxygenase 0.04 Archaeplastida
Solyc04g079290.3.1 No alias heme oxygenase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004392 heme oxygenase (decyclizing) activity IEA Interproscan
BP GO:0006788 heme oxidation IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
MF GO:0047800 cysteamine dioxygenase activity IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR016053 Haem_Oase-like 112 300
No external refs found!