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  5. AMTR_s00078p00092270

AMTR_s00078p00092270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.64

Description : Coenzyme metabolism.coenzyme A synthesis.phosphopantothenoylcysteine decarboxylase


Gene families : OG0004046 (Archaeplastida) Phylogenetic Tree(s): OG0004046_tree ,
OG_05_0004140 (LandPlants) Phylogenetic Tree(s): OG_05_0004140_tree ,
OG_06_0004345 (SeedPlants) Phylogenetic Tree(s): OG_06_0004345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00092270
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Zm00001e016543_P001 No alias phosphopantothenoylcysteine decarboxylase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003382 Flavoprotein 34 164
No external refs found!