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  5. AMTR_s00078p00125670

AMTR_s00078p00125670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.101

Description : Translation factor GUF1 homolog, mitochondrial OS=Ricinus communis


Gene families : OG0002075 (Archaeplastida) Phylogenetic Tree(s): OG0002075_tree ,
OG_05_0002240 (LandPlants) Phylogenetic Tree(s): OG_05_0002240_tree ,
OG_06_0002589 (SeedPlants) Phylogenetic Tree(s): OG_06_0002589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00125670
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Gb_09677 No alias Translation factor GUF1 homolog, mitochondrial... 0.02 Archaeplastida
LOC_Os06g05250.2 No alias Translation factor GUF1 homolog, mitochondrial OS=Oryza... 0.03 Archaeplastida
Pp3c1_4340V3.1 No alias Small GTP-binding protein 0.03 Archaeplastida
Solyc03g058880.4.1 No alias Translation factor GUF1 homolog, mitochondrial... 0.05 Archaeplastida
Zm00001e036519_P002 No alias Translation factor GUF1 homolog, mitochondrial... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 17 152
No external refs found!