1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00078p00177570

AMTR_s00078p00177570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.172

Description : Disease resistance protein RPS2 OS=Arabidopsis thaliana


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00177570
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088510 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00099p00016360 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G12210 RFL1 RPS5-like 1 0.03 Archaeplastida
AT1G12220 RPS5 Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
AT1G12280 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Archaeplastida
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G52660 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT1G61180 No alias LRR and NB-ARC domains-containing disease resistance protein 0.01 Archaeplastida
AT3G15700 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT5G43730 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
AT5G63020 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
GSVIVT01014595001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01017267001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01020273001 No alias Probable disease resistance protein At5g63020... 0.03 Archaeplastida
GSVIVT01020292001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_12853 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_22529 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g57870.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g43440.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g36410.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10265639g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10352957g0010 No alias Probable disease resistance protein At5g43730... 0.03 Archaeplastida
MA_10428221g0010 No alias Probable disease resistance protein At4g27220... 0.03 Archaeplastida
MA_10429016g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10430184g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436071g0020 No alias Probable disease resistance protein At4g27220... 0.03 Archaeplastida
MA_122523g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_128726g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_162415g0010 No alias Probable disease resistance protein At1g61310... 0.04 Archaeplastida
MA_5730007g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_729125g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_733g0010 No alias Probable disease resistance protein At1g15890... 0.04 Archaeplastida
MA_781140g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_7833161g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_834155g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_90078g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_91246g0010 No alias Probable disease resistance protein At1g61190... 0.02 Archaeplastida
MA_9977400g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g048910.2.1 No alias Disease resistance protein At4g27190 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g007790.1.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e001078_P001 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e007598_P002 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0009039 urease activity IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009584 detection of visible light IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0018298 protein-chromophore linkage IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019627 urea metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043419 urea catabolic process IEP Neighborhood
BP GO:0043605 cellular amide catabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071941 nitrogen cycle metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 605 626
IPR002182 NB-ARC 155 424
No external refs found!