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  5. AMTR_s00078p00178290

AMTR_s00078p00178290 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.174

No description available


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00178290
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00141280 evm_27.TU.AmTr_v1... No description available 0.15 Archaeplastida
AMTR_s00099p00016360 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G12220 RPS5 Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G15890 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
GSVIVT01025877001 No alias External stimuli response.biotic stress.pathogen... 0.04 Archaeplastida
Gb_18201 No alias Probable disease resistance protein At1g61180... 0.02 Archaeplastida
LOC_Os03g14900.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os09g14100.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10434517g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_40435g0010 No alias Probable disease resistance protein At1g61310... 0.03 Archaeplastida
Solyc06g048910.2.1 No alias Disease resistance protein At4g27190 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR019347 Axonemal_dynein_light_chain 28 92
No external refs found!