1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00078p00189070

AMTR_s00078p00189070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.195

Description : RNA biosynthesis.transcriptional activation.OFP transcription factor


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000302 (SeedPlants) Phylogenetic Tree(s): OG_06_0000302_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00189070
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.03 Archaeplastida
AT4G04025 No alias No description available 0.03 Archaeplastida
AT4G14860 OFP11, atofp11 ovate family protein 11 0.02 Archaeplastida
GSVIVT01024579001 No alias No description available 0.02 Archaeplastida
LOC_Os01g64410.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os01g64430.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os02g45620.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os03g06350.1 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os04g37510.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os04g48830.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os04g58820.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g36990.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g39950.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os07g48150.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os08g01190.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os10g38880.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os12g06150.1 No alias transcription factor (OFP) 0.02 Archaeplastida
MA_10434319g0010 No alias transcription factor (OFP) 0.04 Archaeplastida
MA_61037g0010 No alias transcription factor (OFP) 0.04 Archaeplastida
Solyc06g073040.1.1 No alias transcription factor (OFP) 0.02 Archaeplastida
Solyc06g074020.2.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Solyc09g065350.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g082080.1.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e007176_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e008181_P001 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e010976_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e016408_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e019432_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e031752_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e031917_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e039401_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e041973_P001 No alias transcription factor (OFP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 288 348
No external refs found!