AMTR_s00079p00035080 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.8

Description : Cell wall.hemicellulose.xyloglucan.modification and degradation.1,6-alpha-xylosidase

Gene families : OG0001404 (Archaeplastida) Phylogenetic Tree(s): OG0001404_tree ,
OG_05_0001143 (LandPlants) Phylogenetic Tree(s): OG_05_0001143_tree ,
OG_06_0001020 (SeedPlants) Phylogenetic Tree(s): OG_06_0001020_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AMTR_s00079p00035080
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00038550 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.modification and... 0.02 Archaeplastida
LOC_Os01g03950.1 No alias 1,6-alpha-xylosidase 0.02 Archaeplastida
Pp3c11_15920V3.1 No alias alpha-xylosidase 1 0.03 Archaeplastida
Pp3c2_24620V3.1 No alias alpha-xylosidase 1 0.01 Archaeplastida
Pp3c3_28310V3.1 No alias alpha-xylosidase 1 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000322 Glyco_hydro_31 8 466
No external refs found!