AMTR_s00079p00035080 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.8

Description : Cell wall.hemicellulose.xyloglucan.modification and degradation.1,6-alpha-xylosidase

Gene families : OG0001404 (Archaeplastida) Phylogenetic Tree(s): OG0001404_tree ,
OG_05_0001143 (LandPlants) Phylogenetic Tree(s): OG_05_0001143_tree ,
OG_06_0001020 (SeedPlants) Phylogenetic Tree(s): OG_06_0001020_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00079p00035080
Cluster	HCCA: Cluster_192

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00079p00038550	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.xyloglucan.modification and...	0.02	Archaeplastida
LOC_Os01g03950.1	No alias	1,6-alpha-xylosidase	0.02	Archaeplastida
Pp3c11_15920V3.1	No alias	alpha-xylosidase 1	0.03	Archaeplastida
Pp3c2_24620V3.1	No alias	alpha-xylosidase 1	0.01	Archaeplastida
Pp3c3_28310V3.1	No alias	alpha-xylosidase 1	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000322	Glyco_hydro_31	8	466

External Links

No external refs found!