AMTR_s00079p00038550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.11

Description : Cell wall.hemicellulose.xyloglucan.modification and degradation.1,6-alpha-xylosidase


Gene families : OG0001404 (Archaeplastida) Phylogenetic Tree(s): OG0001404_tree ,
OG_05_0001143 (LandPlants) Phylogenetic Tree(s): OG_05_0001143_tree ,
OG_06_0001020 (SeedPlants) Phylogenetic Tree(s): OG_06_0001020_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00038550
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00035080 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.modification and... 0.02 Archaeplastida
AT1G68560 ATXYL1, XYL1, TRG1 alpha-xylosidase 1 0.03 Archaeplastida
AT5G11720 No alias Glycosyl hydrolases family 31 protein 0.02 Archaeplastida
GSVIVT01011904001 No alias Cell wall.hemicellulose.xyloglucan.modification and... 0.04 Archaeplastida
Gb_05813 No alias 1,6-alpha-xylosidase 0.02 Archaeplastida
Gb_06380 No alias 1,6-alpha-xylosidase 0.05 Archaeplastida
LOC_Os01g03950.1 No alias 1,6-alpha-xylosidase 0.05 Archaeplastida
LOC_Os06g46340.1 No alias Probable alpha-glucosidase Os06g0675700 OS=Oryza sativa... 0.02 Archaeplastida
MA_10436707g0010 No alias 1,6-alpha-xylosidase 0.02 Archaeplastida
Mp8g10230.1 No alias 1,6-alpha-xylosidase 0.02 Archaeplastida
Pp3c10_1820V3.1 No alias alpha-xylosidase 1 0.05 Archaeplastida
Pp3c11_15920V3.1 No alias alpha-xylosidase 1 0.02 Archaeplastida
Pp3c2_18590V3.1 No alias alpha-xylosidase 1 0.02 Archaeplastida
Solyc02g069670.4.1 No alias Alpha-glucosidase OS=Spinacia oleracea... 0.03 Archaeplastida
Solyc04g007150.3.1 No alias 1,6-alpha-xylosidase 0.03 Archaeplastida
Solyc04g007160.1.1 No alias Alpha-xylosidase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc05g009470.4.1 No alias 1,6-alpha-xylosidase 0.05 Archaeplastida
Zm00001e017022_P001 No alias 1,6-alpha-xylosidase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000322 Glyco_hydro_31 104 592
IPR025887 Glyco_hydro_31_N_dom 19 81
No external refs found!