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  5. AMTR_s00079p00162380

AMTR_s00079p00162380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.74

Description : Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH3/10 matrix-AAA protease heterodimers.prohibitin component


Gene families : OG0000812 (Archaeplastida) Phylogenetic Tree(s): OG0000812_tree ,
OG_05_0003215 (LandPlants) Phylogenetic Tree(s): OG_05_0003215_tree ,
OG_06_0003326 (SeedPlants) Phylogenetic Tree(s): OG_06_0003326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00162380
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AT3G27280 PHB4, ATPHB4 prohibitin 4 0.05 Archaeplastida
AT5G40770 ATPHB3, PHB3 prohibitin 3 0.12 Archaeplastida
Cpa|evm.model.tig00020554.39 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre02.g088000 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre12.g519350 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 Archaeplastida
GSVIVT01001841001 No alias Prohibitin-3, mitochondrial OS=Arabidopsis thaliana 0.13 Archaeplastida
Gb_09762 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.02 Archaeplastida
Gb_24064 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os04g38900.1 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.03 Archaeplastida
LOC_Os07g15880.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_10182777g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_461651g0010 No alias Prohibitin-6, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_9438062g0010 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c25_1160V3.1 No alias prohibitin 6 0.06 Archaeplastida
Pp3c8_25300V3.1 No alias prohibitin 3 0.02 Archaeplastida
Smo163805 No alias Protein degradation.peptidase families.metallopeptidase... 0.05 Archaeplastida
Solyc10g008140.3.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc11g010190.1.1 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.08 Archaeplastida
Zm00001e009600_P001 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e041021_P001 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0030337 DNA polymerase processivity factor activity IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0043626 PCNA complex IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044796 DNA polymerase processivity factor complex IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001107 Band_7 32 210
No external refs found!